Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926837.1_cds_XP_016474786.1_66776
CDS Infomation

[gene=LOC107796515] [db_xref=GeneID:107796515] [protein=DDT domain-containing protein DDR4-like] [protein_id=XP_016474786.1] [location=complement(join(24565..25018,25848..25890,26341..26455,26596..26688,26767..26920,26988..27094,27277..27358,27472..27509,27594..27680,30746..30856,32048..32152))] [gbkey=CDS]
Sequence

ATGGAAATAGTAGTTTTTGCGCCGGAGTTGACGTCGGAAATGGAACTCGTACGTTGTAGG
CTCCGTCAACGGTGGGAGTTAGCCTCTGTTTTAAACTTTCTCAACGTTTTTGAGCCGGTG
CTCAAAATCAAATTGAAAATTTCAGCCGAGGAGATAGAAACAGCCCTCATTGAGCCAAAT
GATACTCTTGCTCAGCTGCATATCATGCTTCTGAAGGGGATACCTCCTGTGAGTAAACTA
CTGAAAGTTTCTAATGGATGGGTGATAGCATTAAGCAAGAAACTTGAAATGTGGTGGCCA
TGGGTTGCTGAAGGGACTTTTCCATTGACTGCAAAAAAGGGAGAGGAGATGTCCACATAC
AAGGCGCTCGACCCAGCAGTTCGCCTGCTTATTCTTAAAGCACTTTGTGAAATTCGAGCT
GATCAAGATGACGCCATATCTTACATTAACCATGAAACTAAAAGTAAAACTGATGCTTCT
GCTTTCCGTAAGGAGAAGCTTGGGGGCAATGGAGATGAAGTTTCATTCTGGTATGATGGG
AATGAAACTATTGGTCATAGATTATACAAGGAAGTTTGTCAAATTGAATCCATCTCAAAG
GTAAAGGACAGGAAAAGCATATCAGCTATCACTTCTCAGTGGGAGACACTTGCTACTACG
TTTGAAGAATTTCAAAATTTTGTGGAAGAGTTTTCATCAAGTCAAGTTAAATGGGAAGCT
GATGTGGGCAAGGCTGTTGAAGCTCATGCTATTCCTGCTCTTCAGAAAATTCAGAGGAAG
AAAGATATGGCTTTGAAGCGACAGCAAAGAGAGCAAAGACTCGTAGAAGGCTTAAGAAAC
CTTGCAGTTCCTCGTTCTTGCAGGATGCGTAGGCCAGTCAATTACAGATGCGATGATTTT
GATAGAGCAATCAATGAGGCCATACAAGTAACAAACAAACGGAAGGGAATTGAAGAACCA
ACAAATGAAACTCAACTCAATGAGCATGTGCCTAGGAATGGAACTAATTCCCTGGATTCC
TCTCCAGCATCTAACTCCATAAGCAGTGATGCCACAGACAGTGAAACTGAGAGTGATGAG
CCTCAAGGAAGCAATGATGACGTTGATGATACCAGTGATGAGGTTGATGAAGCTGATCTT
GATGAAGATGATACTGACTCAATGAAAGAAATTAACATAGCTGGCAACAGAAAGCAGTCA
ATGAAGGAGAATAGTCGCTTGGACTATAGGCCAAGCAGTTGTCGCTACAGTAAGCGGCTA
GCTGGAGTTGATGGCTTTGCTGTTCCAGAAACAACTCATATGGGTGCGAAAAATAGGTTG
AGGCAAAGACCTACTGTTAATACTGCTGCCGAGTCTGTTGTCGTTCCTGATTCAGAAGAT
GAAAACTGA

Peptide Sequence

PEP ID

XP_016474786.1
PEP Infomation

PREDICTED: DDT domain-containing protein DDR4-like [Nicotiana tabacum]
Sequence

MEIVVFAPELTSEMELVRCRLRQRWELASVLNFLNVFEPVLKIKLKISAEEIETALIEPN
DTLAQLHIMLLKGIPPVSKLLKVSNGWVIALSKKLEMWWPWVAEGTFPLTAKKGEEMSTY
KALDPAVRLLILKALCEIRADQDDAISYINHETKSKTDASAFRKEKLGGNGDEVSFWYDG
NETIGHRLYKEVCQIESISKVKDRKSISAITSQWETLATTFEEFQNFVEEFSSSQVKWEA
DVGKAVEAHAIPALQKIQRKKDMALKRQQREQRLVEGLRNLAVPRSCRMRRPVNYRCDDF
DRAINEAIQVTNKRKGIEEPTNETQLNEHVPRNGTNSLDSSPASNSISSDATDSETESDE
PQGSNDDVDDTSDEVDEADLDEDDTDSMKEINIAGNRKQSMKENSRLDYRPSSCRYSKRL
AGVDGFAVPETTHMGAKNRLRQRPTVNTAAESVVVPDSEDEN

Transcript Sequence

Gene sequence data has not been registered.